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Characterization of Breast Cancer Types by Texture Analysis of Magnetic Resonance Images

Rationale and Objectives

This novel study aims to investigate texture parameters in distinguishing healthy breast tissue and breast cancer in breast magnetic resonance imaging (MRI). A specific aim was to identify possible differences in the texture characteristics of histological types (lobular and ductal) of invasive breast cancer and to determine the value of these differences for computer-assisted lesion classification.

Materials and Methods

Twenty patients (mean age 50.6 ± SD 10.6; range 37–70 years), with histopathologically proven invasive breast cancer (10 lobular and 10 ductal) were included in this preliminary study. The median MRI lesion size was 25 mm (range, 7–60 mm). The selected T1-weighted precontrast, post-contrast, and subtracted images were analyzed and classified with texture analysis (TA) software MaZda and additional statistical tests were used for testing the parameters separability.

Results

All classification methods employed were able to differentiate between cancer and healthy breast tissue and also invasive lobular and ductal carcinoma with classification accuracy varying between 80% and 100%, depending on the used imaging series and the type of region of interest. We found several parameters to be significantly different between the regions of interest studied. The co-occurrence matrix based parameters proved to be superior to other texture parameters used.

Conclusions

The results of this study indicate that MRI TA differentiates breast cancer from normal tissue and may be able to distinguish between two histological types of breast cancer providing more accurate characterization of breast lesions thereby offering a new tool for radiological analysis of breast MRI.

Breast magnetic resonance imaging (MRI) has gained great importance as a valuable adjunct to both mammography and ultrasound in the detection of primary and recurrent breast cancer over the past 10 years . Breast MRI has excellent sensitivity for the detection of invasive breast cancer. Reported sensitivities are often greater than 90% for invasive cancers using dynamic contrast-enhanced MRI (DCE-MRI) . However, the reported specificities have displayed a high range, varying from 20% to 100% ( ).

The most common pathologic types of invasive breast cancer are invasive lobular carcinoma (ILC), which accounts for 10%–15% of all diagnosed breast carcinomas, and invasive ductal carcinoma (IDC) accounting up to 80% of all breast cancers. The dominating microscopic type IDC “not otherwise specified” is defined as one with no specific pattern in at least 50% of its area. Classic ILC, on the other hand, is defined as one composed of noncohesive cells individually dispersed or arranged in single file linear pattern in a fibrous stroma .

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Material and methods

Patients

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Table 1

Patient Data: Breast Magnetic Resonance Imaging and Histopathological Findings

Patient no. Age (y) Histology Tumor size ∗ first/second slice (mm) P1 62 IDC 22/26 P2 65 IDC 14/13 P3 45 IDC 21/18 P4 67 IDC 17/19 P5 40 IDC 56/57 P6 46 IDC 8/9 P7 37 IDC 12/11 P8 46 IDC 13/13 P9 62 IDC 35/36 P10 38 IDC 14/15 P11 60 ILC 40/41 P12 44 ILC 7/7 P13 43 ILC 34/37 P14 37 ILC 54/52 P15 48 ILC 60/55 P16 43 ILC 25/28 P17 53 ILC 13/12 P18 58 ILC 32/33 P19 70 ILC 26/30 P20 48 ILC 25/30

IDC, invasive ductal carcinoma; ILC, invasive lobular carcinoma.

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MRI Acquisition

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Texture Analysis and Feature Selection

Image selection

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Figure 1, Magnetic resonance images of a patient (P11) with invasive lobular carcinoma. Image slices from five different image series: precontrast (a) , contrast first (b) , subtraction first (c) , contrast last (d) , and subtraction last (e) .

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Regions of interest definition

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Figure 2, Subtracted magnetic resonance images from three-dimensional transversal T1-weighted gradient echo sequence of patient (P16) with invasive lobular carcinoma (ILC) (a, c) and patient (P3) with invasive ductal carcinoma (b, d) . Standard quadratic 15 × 15 pixels region of interest (std-ROI) and std-ref ROI are drawn in the tumor area and reference area in healthy breast (a, b) and irregular-ROI ILC and irregular-ROI invasive ductal carcinoma (IDC) corresponding to the enhancing tumor area (c, d) .

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Texture features

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Table 2

Texture Parameters Used in Analysis

Histogram Mean, variance, skewness, kurtosis, percentiles 1%, 10%, 50%, 90%, and 99% Absolute gradient (GrM) Mean, variance, skewness, kurtosis and percentage of pixels with nonzero gradient Co-occurrence matrix (COM) Angular second moment, contrast, correlation, sum of squares, inverse difference moment, sum average, sum variance, sum entropy, entropy, difference variance and difference entropy Run-length matrix (RLM) Run-length nonuniformity, gray-level nonuniformity, long-run emphasis, short run emphasis, and fraction of image in runs Autoregressive model (ARM) Theta: model parameter vector, 4 parameters; Sigma: standard deviation of the driving noise Wavelet Energy of the wavelet coefficients in subbands

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Tissue Classification

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Other Statistical Analyses

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Results

Tissue Classifications

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Table 3

Classification Results of Texture Analysis between Tumor Area (std-ROI and Irregular-ROI) and Healthy Reference Area (std-ref ROI) and between Ductal and Lobular Carcinoma (Irregular-ROI IDC vs. Irregular-ROI ILC)

Imaging Sequence Analyzed ROIs PCA LDA NDA Precontrast std-ROI vs. std-ref ROI 6/400 / 400 / 40 irregular-ROI vs. std-ref ROI 4/400 / 400 / 40 Contrast first std-ROI vs. std-ref ROI 1/40 1/40 2/40 irregular-ROI vs. std-ref ROI 4/400 / 400 / 40 Subtraction first std-ROI vs. std-ref ROI 5/400 / 400 / 40 irregular-ROI vs. std-ref ROI0 / 400 / 400 / 40 Contrast last std-ROI vs. std-ref ROI 8/400 / 400 / 40 irregular-ROI vs. std-ref ROI 4/400 / 400 / 40 Subtraction last std-ROI vs. std-ref ROI 1/400 / 400 / 40 irregular-ROI vs. std-ref ROI0 / 400 / 400 / 40 Precontrast irregular-ROI IDC vs. irregular-ROI ILC 7/400 / 40 2/40 Contrast first irregular-ROI IDC vs. irregular-ROI ILC 9/400 / 400 / 40 Subtraction first irregular-ROI IDC vs. irregular-ROI ILC 7/400 / 400 / 40 Contrast last irregular-ROI IDC vs. irregular-ROI ILC 8/400 / 40 2/40 Subtraction last irregular-ROI IDC vs. irregular-ROI ILC 5/40 5/400 / 40

IDC, invasive ductal carcinoma; ILC, invasive lobular carcinoma; PCA, principal component analysis; LDA, linear discriminant analysis; NDA, nonlinear discriminant analysis.

The number of misclassified samples per all analyzed samples is calculated for all imaging sequences. Classification is based on 1-NN for features of principal component analysis (PCA) and linear discriminant analysis (LDA) and artificial neural network for nonlinear discriminant analysis (NDA) features. The best classification results are in bold face.

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Statistical Tests

Cancer tissue versus healthy reference tissue

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Table 4

The Numbers of Parameters having Statistically Significant Differences ( P < .05) Analyzed with Wilcoxon Test for every Tested Imaging Sequence in each Parameter Group between Healthy Tissue and Cancer Tissue are presented in Columns

Texture Parameter Groups Precontrast Contrast First Subtraction First Contrast Last Subtraction Last std-ROI vs.

std-ref ROI Histogram ( n = 11) 9 0 7 0 8 GrM ( n = 5) 0 0 2 1 2 COM ( n = 220) 20 60 139 70 83 RLM ( n = 20) 2 8 12 15 3 ARM ( n = 5) 1 0 3 1 3 Wavelet ( n = 16) 4 2 10 6 7Total ( n = 277)367017393106 irregular-ROI vs.

std-ref ROI Histogram ( n = 11) 9 0 7 0 9 GrM ( n = 5) 0 1 1 0 0 COM ( n = 220) 75 42 76 64 61 RLM ( n = 20) 5 7 6 12 6 ARM ( n = 5) 1 2 4 2 2 Wavelet ( n = 16) 10 4 9 6 7Total ( n = 277)100561038485

ARM, autoregressive model; COM, co-occurrence matrix; GrM, gradient matrix; RLM, run-length matrix; n , number parameters on each group.

The total number of evaluated texture parameters is 277. The total number of parameters having statistically significant differences is in bold face.

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Invasive ductal carcinoma vs. invasive lobular carcinoma

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Table 5

The Numbers of Parameters having Statistically Significant Differences ( P < .05) Analyzed with Mann-Whitney U Test for every Tested Imaging Sequence in Each Parameter Group between IDC and ILC are Presented in Columns

Texture Parameter Groups Pre Contrast Contrast First Subtraction First Contrast Last Subtraction Last irregular-ROI IDC vs. irregular-ROI ILC Histogram ( n = 11) 1 0 1 0 0 GrM ( n = 5) 0 0 0 1 0 COM ( n = 220) 4 10 50 38 19 RLM ( n = 20) 0 0 0 0 0 ARM (5) 0 0 0 1 0 Wavelet ( n = 16) 0 0 2 1 1Total ( n = 277)510534120

ARM, autoregressive model; COM, co-occurrence matrix; GrM, gradient matrix; RLM, run-length matrix; n , number parameters on each group.

The total number of evaluated texture parameters is 277. The total number of parameters having statistically significant differences is in bold face.

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Discussion

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