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Comparison of the Quantitative CT Imaging Biomarkers of Idiopathic Pulmonary Fibrosis at Baseline and Early Change with an Interval of 7 Months

Rationale and Objectives

Median survival of patients with idiopathic pulmonary fibrosis (IPF) is 2–5 years. Sensitive imaging metrics can play a role in detecting early changes in therapeutic development. The aim of the present study was to compare known computed tomography (CT) histogram kurtosis and a classifier-based quantitative score to assess baseline severity and change over time in patients with IPF.

Materials and Methods

A total of 57 patients with at least baseline and paired follow-up scans were selected from an imaging database of standardized CT scans obtained from patients with IPF. CT histogram measurement of kurtosis and quantitative lung fibrosis (QLF) and quantitative interstitial lung disease (QILD) scores from a classification algorithm were calculated. Spearman rank correlations were used to assess associations between baseline severity and changes for all CT-derived measures compared to forced vital capacity (FVC) and carbon monoxide diffusion capacity (DL CO ) (percent predicted).

Results

At baseline, mean (±SD) of kurtosis was 2.43 (±1.83). Mean (±SD) values of QLF and QILD scores were 20.7% (±13.4) and 43.3% (±20.0), respectively. All baseline histogram indices and QLF and QILD scores were correlated well with baseline FVC and DL CO . When assessing associations with changes in FVC and DL CO over time, only QLF score was statistically significant (ρ = −0.57; P < .0001 for FVC and ρ = −0.34; P = .025 for DL CO ), whereas kurtosis was not.

Conclusions

Classifier-model-derived scores (QLF and QILD), based on a set of texture features, are associated with baseline disease extent and are also a sensitive measure of change over time. A QLF score can be used for measuring the extent of disease severity and longitudinal changes.

Idiopathic pulmonary fibrosis (IPF) is a rare and ultimately fatal lung disease of unknown cause with a median survival of 2–5 years . Although several studies have identified risk factors and histopathologic features, the natural history of IPF is poorly understood and the rate of progression for a given patient can be unpredictable. Disease progression ranges from very rapid to remaining stable over several years and may be punctuated by acute worsening . Diagnosing IPF can also be challenging as distinct from other diffuse lung diseases . High-resolution computed tomography (HRCT) plays an indispensable role in the diagnosis of IPF. Predicating the presence of a classically subpleural, basilar distribution of interstitial abnormalities, or other known causes of interstitial lung disease, the HRCT features obviate the need for surgical biopsy . Evidence of classic visual feature of IPF on thoracic CT is often used as inclusion criteria in clinical trials. Guidelines have been developed for assigning a confidence to a diagnosis of IPF on CT . There are currently very limited treatment options for patients diagnosed with IPF. Important to the success of IPF clinical trials are the inclusion of correctly characterized patients and the demonstration of clinically meaningful benefits .

Development of a sensitive surrogate measure for IPF has become increasingly urgent, as the understanding of underlying pathophysiology of IPF has led to several potential, new antifibrotic therapies . In measuring treatment outcomes, a change in forced vital capacity (FVC) has been most often used. The progression is normally defined as 10% drop in FVC. The implication of progression in FVC differs in patients with moderate and severe IPF. Other outcomes have included the 6-minute walk test, carbon monoxide diffusion capacity (DL CO ), and quality of life instruments . More recently the Food and Drug Administration suggested that mortality as an ideal endpoint be used in pivotal clinical trials . The usage of survival requires large study populations and long trials making this economically and logistically challenging. Overall survival as an outcome need to consider systematic biases at clinical centers, socioeconomic status, and censoring because of lung transplant if a patient is eligible . Development and evaluation of the HRCT method, whose measurement is sensitive to the early localized changes, is important to assess or confirm the effect of therapy on patients with IPF.

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Materials and methods

Patient Selection

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CT Scanning Protocol

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Quantitative CT Image Analysis

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CT Histogram Features

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Kurtosis=(x−x¯)4[∑(x−x¯)2]2−3, Kurtosis

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Figure 1, Two patients with mild and severe IPF (FVC 65%, and 47%, respectively): kurtosis measures are 5.00 and 0.41 in subjects with mild and severe IPF, respectively. Corresponding skewness measures are 1.48 and 0.80. FVC, forced vital capacity; IPF, idiopathic pulmonary fibrosis.

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Quantitative CT Scores from Texture Classification Model

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Statistical Analysis

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Results

Descriptive Summary Statistics

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Table 1

Characteristics of Idiopathic Pulmonary Fibrosis Subjects

Variables Baseline ( N = 57) Follow-Up ( N = 57)P value Mean (SD) Median (IQR) Mean (SD) Median (IQR) Pulmonary function tests TLC volume ∗ (L) 4.11 (0.96) 4.13 (0.87) 3.93 (1.01) 4.04 (1.42) .2190 RV volume ∗ (L) 1.50 (0.69) 1.44 (0.81) 1.36 (0.52) 1.31 (0.81) .9523 FVC (% pred) 65.18 (12.44) 66.40 (18.80) 62.79 (14.05) 63.60 (18.40) .0001 † FEV 1 (% pred) 71.34 (13.03) 72.60 (18.30) 68.28 (14.82) 69.00 (20.70) <.0001 DL CO ∗ (% pred) 49.67 (14.19) 47.00 (15.70) 45.18 (13.53) 44.50 (17.50) <.0001 CT histogram indexes Kurtosis 2.81 (1.83) 2.38 (2.44) 2.26 (1.77) 1.83 (1.93) <.0001 † Mean −768.28 (53.62) −772.87 (63.88) −756.40 (62.82) −757.91 (79.06) .0329 † Variance 44,299.30 (15,065.58) 42,578.12 (21,196.77) 44,299.30 (15,065.58) 42,578.12 (21,196.77) .1626 Skewness 1.58 (0.42) 1.59 (0.53) 1.47 (0.43) 1.46 (0.53) <.0001 Entropy 6.37 (0.24) 6.33 (0.29) 6.39 (0.27) 6.36 (0.31) .1741 Median −829.32 (50.63) −832.00 (62.00) −819.67 (56.90) −817.00 (58.00) .0811 Quantitative CT texture scores QLF score (%) 17.63 (10.10) 17.00 (13.00) 20.37 (11.99) 18.00 (14.00) <.0001 † Ground glass score (%) 17.53 (7.44) 16.00 (11.00) 17.25 (7.30) 17.00 (10.00) .6435 QILD score (%) 39.02 (17.22) 38.00 (21.00) 41.33 (17.86) 39.00 (23.00) .0453 QLF volume (L) 0.63 (0.39) 0.56 (0.31) 0.71 (0.41) 0.64 (0.35) .0002 Ground glass volume (L) 0.63 (0.23) 0.61 (0.35) 0.61 (0.25) 0.61 (0.33) .6590 QILD volume (L) 1.39 (0.63) 1.30 (0.55) 1.46 (0.65) 1.31 (0.64) .0521 †

CT, computed tomography; TLC, total lung capacity; RV, residual volume. DL CO , carbon monoxide diffusion capacity; FEV, forced expiratory volume in 1 second; FVC, forced vital capacity; IQR, interquartile range; QLF, quantitative lung fibrosis; QILD, quantitative interstitial lung disease; SD, standard deviation.

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Figure 2, (a) Baseline CT scan: FVC is 54.4% and CT TLC volume is 3.51 L; (b) follow-up CT scan: FVC is 53.5%, DL CO decreased by 8.6%, and CT volume is 3.34 L; (c) baseline classification overlay for QLF score at whole lung of 15% in blue and red and QILD of 43% (not overlaid); (d) follow-up classification overlay for QLF score of 22% in blue and red and QILD of 52% (not overlaid); (e) baseline histogram with kurtosis of 2.24; (f) follow-up kurtosis of 2.51, which is greater than baseline (indicating improvement which is not consistent with FVC and QLF). CT, computed tomography; DL CO , carbon monoxide diffusion capacity; FVC, forced vital capacity; QILD, quantitative interstitial lung disease; QLF, quantitative lung fibrosis. For interpretation of the references to color in this figure legend, the reader is referred to the web version of this article.

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Associations

Whole Lung

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Table 2

Association at Baseline at Whole Lung

Baseline Percent Predicted FVC (%), N = 57 Percent Predicted FEV 1 (%), N = 57 Percent Predicted DL CO (%), N = 51 CT histogram indexes Kurtosis 0.56 ( P < .0001) 0.49 ( P = .0001) 0.44 ( P = .0014) Mean −0.60 ( P < .0001 ) −0.45 ( P = .0005) −0.36 ( P = .0094) Variance −0.55 ( P < .0001) −0.56 ( P < .0001) −0.31 ( P = .0264) Skewness 0.50 ( P < .0001) 0.43 ( P = .0007) 0.07 ( P = .003) Entropy −0.54 ( P < .0001) −0.51 ( P < .0001) −0.44 ( P = .0013) Median −0.22 ( P = .107) −0.17 ( P = .197) −0.2544 ( P = .072) Quantitative CT texture scores QLF score (%) −0.59 ( P < .0001) −0.51 ( P < .0001) −0.46 ( P = .0007) Ground glass (%) −0.36 ( P = .0053) −0.20 ( P = .1270) −0.28 ( P = .0431) QILD score (%) −0.58 ( P < .0001) −0.50 ( P = .0001) −0.45 ( P = .0009) QLF volume (L) −0.44 ( P = .0006) − 0.38 (P = .0033) −0.35 ( P = .0123) Ground glass (L) −0.04 ( P = .75) 0.059 ( P = .66) 0.04 ( P = .78) QILD volume (L) −0.30 ( P = .021) −0.25 ( P = .064) −0.22 ( P = .117)

CT, computed tomography; DL CO , carbon monoxide diffusion capacity; FEV, forced expiratory volume in 1 second; FVC, forced vital capacity; QLF, quantitative lung fibrosis; QILD, quantitative interstitial lung disease.

Figure 3, Association with PFT of kurtosis and QLF at baseline for whole lung. DL CO , carbon monoxide diffusion capacity; FEV, forced expiratory volume in 1 second; FVC, forced vital capacity; QLF, quantitative lung fibrosis.

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Table 3

Association in the Change Assessment for Whole Lung

Changes Percent Predicted FVC (%), N = 57, ρ ( P value) Percent Predicted FEV 1 (%), N = 57, ρ ( P value) DL CO (%), N = 43, ρ ( P value) CT histogram indexes Kurtosis 0.26 ( P = .0513) 0.0719 ( P = .60) −0.1626 ( P = .30) Mean −0.54 ( P < .0001) −0.4442 ( P = .0005) −0.2384 ( P = .12) Variance −0.22 ( P = .1061) −0.2077 ( P = .1211) −0.2505 ( P = .11) Skewness 0.41 ( P = .0017) 0.2116 ( P = .1140) 0.0414 ( P = .79) Entropy −0.36 ( P = .0055) −0.3195 ( P = .0154) −0.2605 ( P = .0916) Median −0.52 ( P < .0001) −0.4099 ( P = .0015) −0.2459 ( P = .11) Quantitative CT texture scores QLF score (%)−0.57 (P < .0001) −0.49 ( P = .0001) −0.34 ( P = .0251) Ground glass (%) −0.31 ( P = .0185) −0.26 ( P = .0512) −0.034 ( P = .83) QILD score (%) −0.45 ( P = .0004) −0.39 ( P = .0030) −0.21 ( P = .17) QLF volume (L)−0.51 ( P < .0001) −0.44 ( P = .0005) −0.37 ( P = .0149) Ground glass (L) −0.19 ( P = .15) −0.14 ( P = .32) 0.018 ( P = .91) QILD volume (L) −0.38 ( P = .0033) −0.34 ( P = .0103) −0.27 ( P = .0753)

CT, computed tomography; DL CO , carbon monoxide diffusion capacity; FEV, forced expiratory volume in 1 second; FVC, forced vital capacity; QLF, quantitative lung fibrosis; QILD, quantitative interstitial lung disease.

Figure 4, Association with changes in PFT of kurtosis and QLF for whole lung. DL CO , carbon monoxide diffusion capacity; FEV, forced expiratory volume in 1 second; FVC, forced vital capacity; QLF, quantitative lung fibrosis.

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Lobes

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Table 4

Association in Each Lobe and Lung

Parenchymal Regions Baseline ( N = 57) Changes ( N = 57) QLF Score vs. Percent Predicted FVC (%), ρ ( P value) Kurtosis vs. Percent Predicted FVC (%), ρ ( P value) Skewness vs. Percent Predicted FVC (%), ρ ( P value) QLF Score vs. Percent Predicted FVC (%), ρ ( P value) Kurtosis vs. Percent Predicted FVC (%), ρ ( P value) Skewness vs. Percent Predicted FVC (%), ρ ( P value) Right upper lobe −0.48 ( P = .0002) 0.41 ( P = .0015) 0.37 ( P = .0041) −0.53 ( P < .0001) 0.36 ( P = .0062) 0.37 ( P = .0045) Right middle lobe −0.52 ( P < .0001) 0.49 ( P = .0001) 0.46 ( P = .0003) −0.40 ( P = .0023) 0.21 ( P = .12) 0.22 ( P = .0993) Right lower lobe −0.41 ( P = .0013) 0.44 ( P = .0005) 0.39 ( P = .0027) −0.54 ( P < .0001) 0.19 ( P = .17) 0.34 ( P = .0108) Left upper lobe −0.60 ( P < .0001) 0.53 ( P < .0001) 0.48 ( P = .0001) −0.56 ( P < .0001) 0.26 ( P = .0479) 0.38 ( P = .0036) Left lower lobe −0.55 ( P < .0001) 0.55 ( P < .0001) 0.49 ( P = .0001) −0.53 ( P < .001) 0.34 ( P = .0089) 0.48 ( P = .0002) Right lung −0.54 ( P < .0001) 0.52 ( P < .0001) 0.47 ( P = .0002) −0.55 ( P < .0001) 0.23 ( P = .0908) 0.34 ( P = .0095) Left lung −0.60 ( P < .0001) 0.54 ( P < .0001) 0.48 ( P = .0001) −0.54 ( P < .0001) 0.29 ( P = .0275) 0.44 ( P = .0006)

FVC, forced vital capacity; QLF, quantitative lung fibrosis.

Figure 5, (a) Association with FVC of kurtosis at baseline for each lobe and lung. (b) Association with FVC of QLF at baseline for each lobe and lung. FVC, forced vital capacity; RUL, right upper lobe; RML, right middle lobe; RLL, right lower lobe; LUL, left upper lobe; LLL, left lower lobe.

Figure 6, (a) Association with changes in FVC of kurtosis for each lobe and lung. (b) Association with changes in FVC of QLF for each lobe and lung. FVC, forced vital capacity; LLL, left lower lobe; LUL, left upper lobe; QLF, quantitative lung fibrosis; RLL, right lower lobe; RML, right middle lobe; RUL, right upper lobe.

Table 5

Association in Each Lobe and Lung

Parenchymal Regions Baseline ( N = 51) Changes ( N = 43) QLF Score vs. Percent Predicted DL CO (%), ρ ( P value) Kurtosis vs. Percent Predicted DL CO (%), ρ ( P value) Skewness vs. Percent Predicted DL CO (%), ρ ( P value) QLF Score vs. Percent Predicted DL CO (%), ρ ( P value) Kurtosis vs. Percent Predicted DL CO (%), ρ ( P value) Skewness vs. Percent Predicted DL CO (%), ρ ( P value) Right upper lobe −0.37 ( P = .0078) 0.36 ( P = .0097) 0.30 ( P = .0302) −0.31 ( P = .0462) 0.04 ( P = .80) 0.074 ( P = .64) Right middle lobe −0.39 ( P = .0049) 0.35 ( P = .0116) 0.30 ( P = .0331) −0.17 ( P = .27) −0.13 ( P = .41) −0.10 ( P = .50) Right lower lobe −0.38 ( P = .0057) 0.43 ( P = .0019) 0.35 ( P = .0117) −0.24 ( P = .12) −0.15 ( P = .33) −0.034 ( P = .83) Left upper lobe −0.43 ( P = .0016) 0.39 ( P = .0050) 0.32 ( P = .0200) −0.30 ( P = .0537) 0.004 ( P = .98) 0.17 ( P = .27) Left lower lobe −0.49 ( P = .0002) 0.45 ( P = .0008) 0.39 ( P = .0044) −0.33 ( P = .0294) −0.0168 ( P = .92) 0.19 ( P = .22) Right lung −0.43 ( P = .0016) 0.42 ( P = .0022) 0.38 ( P = .0055) −0.27 ( P = .079) 0.20 ( P = .21) −0.0439 ( P = .78) Left lung −0.48 ( P = .0004) 0.43 ( P = .0016) 0.38 ( P = .0056) −0.32 ( P = .034) −0.078 ( P = .62) 0.25 ( P = .11)

DL CO , carbon monoxide diffusion capacity; QLF, quantitative lung fibrosis.

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Discussion

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