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Neural Network Ensemble-Based Computer-Aided Diagnosis for Differentiation of Lung Nodules on CT Images

Rationale and Objectives

To evaluate the diagnostic performance of a neural network ensemble-based computer-aided diagnosis (CAD) scheme for classifying lung nodules on thin-section computed tomography (CT).

Materials and Methods

Thirty-two CT images that depicted 19 malignant nodules and 13 benign nodules were used. One of three possible classifications (probably benign, uncertain, and probably malignant) for each nodule was determined by using a neural network ensemble-based CAD scheme. The images were presented to three senior radiologists (each with more than 10 years of thoracic radiology experience) who were asked to determine the classification for each nodule blindly. The radiologists made their diagnostic decisions solely based on images and excluded any external data. The performance of the CAD scheme and of the radiologists was evaluated with receiver operating characteristic (ROC) analysis and agreement analysis.

Results

Areas under the ROC curve (Az values) for the CAD scheme and the radiologist group were 0.79 and 0.82, respectively, and the partial areas under the ROC curves at a range of sensitivity values greater than or equal to 90% were 0.051 and 0.020 ( P = .203), respectively. The weighted Kappa coefficients between the CAD scheme and each radiologist were 0.657, 0.431, and 0.606, respectively. For the diagnosis of the 11 small nodules (with diameters not greater than 10 mm), areas under the ROC curves of the CAD scheme and the radiologist group were 0.915 and 0.683 ( P = .227), respectively.

Conclusions

The diagnostic performance of the neural network ensemble-based CAD scheme is similar to that of senior radiologists for classifying lung nodules on thin-section CT. Furthermore, the CAD scheme has certain advantages in diagnosing small lung nodules.

Several investigations have shown that early detection of lung cancer may allow more timely therapeutic intervention and thus a more favorable prognosis for the patient . At present, computed tomography (CT) imaging is regarded as the most effective means for the early detection of asymptomatic lung cancer. Although CT imaging technology has provided increasingly clear images, it remains very difficult for radiologists to distinguish benign from malignant lesions, and the interpretation of a large number of CT images is a time-consuming task for radiologists. Therefore, a number of investigators are developing computer-aided diagnostic (CAD) schemes to facilitate the differentiation between benign and malignant lung nodules on CT images . For development of a CAD scheme, it is necessary to develop efficient computer algorithms. These computer algorithms are tested typically by means of the leave-one-out technique. Shah et al calculated 75 features that measured the attenuation, shape, and texture of the nodule in CT images. These features were then input into a feature selection step and four different classifiers (linear discriminant analysis, quadratic discriminant, logistic regression, and recursive partitioning) to determine if the diagnosis could be predicted from the feature vector. A leave-one-out testing resulted in the areas under the receiver operating characteristic (ROC) curve of range from 0.68 to 0.92. Silva et al applied Moran’s index and Geary’s coefficient in linear discriminators to the diagnosis of lung nodules as malignant or benign in computerized tomography images. A leave-one-out procedure was used to provide a less biased estimate of the classifiers’ performance. The two analyzed functions and its combinations provided more than 90% of accuracy and an area under ROC curve above 0.85, indicating a promising ability to discriminate between the benign and malignant nodules.

The basic concept of a CAD scheme is to provide a computer output to assist a radiologist’s image readings. Therefore, for the development of a successful CAD scheme, it is necessary not only to develop computer algorithms, but also to investigate how useful the computer output would be for radiologists in making their diagnosis and how to maximize the effect of the computer output on their diagnosis . Matsuki et al developed a computerized scheme using the artificial neural network (ANN) to distinguish benign from malignant nodules based on 7 clinical parameters and 16 radiologic findings. The average area under the ROC curve for all radiologists increased from 0.831 to 0.959 ( P < .001) with the use the ANN output, when differentiating 56 benign nodules from 99 malignant nodules on high-resolution CT, indicating that the diagnostic accuracy of radiologists could be improved by the computerized scheme. Awai et al assessed the diagnostic performance of ten board-certified radiologists with 8–26 years of experience and 9 radiology residents with 1–4 years of experience in distinguishing between benign and malignant nodules (33 nodules in all) first without and then with the CAD output. The mean areas under the ROC curve achieved without and with the CAD system were 0.910 and 0.944, respectively, for the 10 board-certified radiologists ( P = .190), and 0.768 and 0.901, respectively, for the 9 radiology residents ( P = .009). It could be concluded that the use of the CAD system significantly improved the diagnostic performance of radiology residents for assessment of the malignancy of pulmonary nodules; however, it did not improve that of board-certified radiologists.

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Materials and methods

Database

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CAD Scheme for Diagnosis of Lung Nodules

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Figure 1, Schematic diagram of the two-layered neural network ensemble system for the classification of pulmonary nodules on thin-section CT images. NNE = neural network ensemble. Both the overlapping feature subsets (subset 1 and subset 2) consisted of 13 image features from out of the 15 selected features, respectively. NNE 1 was applied to feature subset 1 to differentiate uncertain nodules from non-uncertain nodules. NNE 2 was the second ensemble that trained separately from the first one. It was applied to feature subset 2 to differentiate those non-Uncertain nodules between probably benign nodules and probably malignant nodules.

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Observer Performance Study

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Data Analysis

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Results

Training Performance of the CAD Scheme

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Diagnostic Accuracy of the CAD Scheme

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Table 1

Diagnosis Results for Radiologists and the CAD Scheme ( n )

Radiologist A Radiologist B Radiologist C CAD Scheme Pathology Result PB UC PM PB UC PM PB UC PM PB UC PM Benign (13) 7 4 2 7 2 4 6 4 3 7 2 4 Malignant (19) 3 3 13 2 3 14 3 0 16 1 3 15 Total (32) 10 7 15 9 5 18 9 4 19 8 5 19

CAD, computer-aided diagnosis; PB, probably benign; UC, uncertain; PM, probably malignant.

For the CAD scheme, 10 nodules had been misclassified, that is, four benign nodules were determined to be probably malignant nodules and two were uncertain; one malignant nodule was determined to be a probably benign nodule and three were uncertain. These kinds of diagnosis results were considered to be inconsistencies with the pathology diagnosis.

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Figure 2, Computed tomography scans of patients whose lung nodules were misclassified by the computer-aided diagnosis scheme. (a) Lung cancer in an 80-year-old woman; (b) inflammatory nodule in a 54-year-old man; (c) hamartoma in a 38-year-old man; (d) calcified lesion in a 58-year-old woman.

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Figure 3, Computed tomography scans of patients whose lung nodules were diagnosed correctly by the computer-aided diagnosis scheme but wrongly by the radiologists. (a) Inflammatory nodule in a 73-year-old woman; (b) metastasis from breast cancer in a 43-year-old woman.

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Figure 4, A comparison of receiver operating characteristic (ROC) curves for the computer-aided diagnosis (CAD) scheme and the radiologists. The light shadow shows the partial area (0.020) under the ROC curve for a range of sensitivity values greater than or equal to 90% for the radiologists, and the dark shadow plus the light shadow shows that for the CAD scheme (0.051).

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Agreement of Diagnosis Results between the CAD Scheme and Radiologists

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Table 2

Crosstabs of Agreement between the CAD Scheme and Radiologists ( n )

Radiologist A Radiologist B Radiologist C Radiologist Group CAD Scheme PB UC PM PB UC PM PB UC PM PB UC PM PB 6 2 0 4 1 3 5 2 1 6 1 1 UC 3 2 0 3 2 0 3 1 1 3 2 0 PM 1 3 15 2 2 15 1 1 17 1 2 16 Weighted Kappa 0.657 0.431 0.606 0.653

CAD, computer-aided diagnosis; PB, probably benign; UC, uncertain; PM, probably malignant.

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Diagnosis Results for Special Nodules

Diagnosis for small nodules (diameter ≤10 mm)

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Table 3

Diagnosis Results for Small Nodules (Diameter ≤10 mm) for Radiologist Group and the CAD Scheme ( n )

Radiologist Group CAD Scheme Pathology Result PB UC PM PB UC PM Benign (7) 5 1 1 6 1 0 Malignant (4) 2 1 1 1 0 3 Total (11) 7 2 2 7 1 3

CAD, computer-aided diagnosis; PB, probably benign; UC, uncertain; PM, probably malignant.

Figure 5, Comparison of receiver operating characteristic curves for the computer-aided diagnosis scheme and the radiologists when diagnosing small nodules.

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Diagnosis for metastases

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Figure 6, Computed tomography scans of patients who had metastases. (a) Lung metastasis from breast cancer in a 43-year-old woman; (b) lung metastasis from lung cancer in a 78-year-old woman; (c, d) lung metastasis from thyroid cancer in a 48-year-old woman.

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Discussion

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Acknowledgments

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