Introduction
Spatial heterogeneity of lung aeration and strain (change volume/resting volume) occurs at microscopic levels and contributes to lung injury. Yet, it is mostly assessed with histograms or large regions-of-interest. Spatial heterogeneity could also influence regional gene expression. We used positron emission tomography (PET)/computed tomography (CT) to assess the contribution of different length-scales to mechanical heterogeneity and to direct lung injury biological pathway identification.
Materials and Methods
Sheep exposed to mild ( n = 5, supine and n = 3, prone) and moderate ( n = 6, supine) systemic endotoxemia were protectively ventilated. At baseline, 6 hours and 20 hours length-scale analysis was applied to aeration in CT (mild groups) and PET transmission (moderate group) scans; and voxel-level strain derived from image registration of end-inspiratory and end-expiratory CTs (mild). 2-deoxy-2-[(18)F]fluoro-d-glucose ( 18 F-FDG)-PET kinetics parameters in ventral and dorsal regions were correlated with tissue microarray gene expression (moderate).
Results
While aeration and strain heterogeneity were highest at 5–10 mm length-scales, larger length-scales contained a higher fraction of strain than aeration heterogeneity. Contributions of length-scales >5–10 mm to aeration and strain heterogeneity increased as lung injury progressed ( p < 0.001) and were higher in supine than prone animals. Genes expressed with regional correlation to 18 F-FDG-PET kinetics (|r| = 0.81 [0.78–0.85]) yielded pathways associated with immune system activation and fluid clearance.
Conclusion
Normal spatial heterogeneity of aeration and strain suggest larger anatomical and functional determinants of lung strain than aeration heterogeneity. Lung injury and supine position increase the contribution of larger length-scales. 18 F − FDG-PET-based categorization of gene expression results in known and novel biological pathways relevant to lung injury.
Introduction
Excessive mechanical forces can produce lung injury during mechanical ventilation. Indeed, regional strain (change in lung volume/resting lung volume) has been shown to relate to local lung inflammation particularly in the presence of systemic inflammation ( ). Excessive mechanical forces can occur not only at large lung areas of hyperinflation ( ) but also at the microscopic level. Experiments utilizing total lung capacity maneuvers in excised dog lobes revealed heterogeneity of regional gas volume changes in relation to gas volume at total lung capacity at length-scales as small as ∼2 mm ( ). In fact, pressure–volume relationships determining lung expansion are related to properties that scale down to the microscopic level of collagen and elastin fibers ( ). A theoretical study indicated that mechanical stress is significantly amplified around collapsed alveoli ( ). Despite the relevance of such small length-scale phenomena, most studies on pulmonary static and dynamic strain are based on whole lung ( ) or large regions-of-interest (ROI) ( ). Given that heterogeneity of lung expansion is relevant to lung injury, it is important to understand its topographic basis. Yet, information is scant on the length-scales contributing to strain and aeration heterogeneity during mechanical ventilation. Computed tomography (CT) imaging and elastic registration allow for estimation of a range of such length-scale contribution by assessment of in vivo regional tissue strain and aeration.
Lung injury results from complex interactions among mechanical and biological factors ( ). The inflammatory response to local and global stimuli includes recruitment of cells such as neutrophils and affects pulmonary regional metabolic activity, allowing for its in vivo assessment with the positron emission tomography (PET) tracer 2-deoxy-2-[(18)F]fluoro-d-glucose ( 18 F-FDG) ( ). Recently, we showed that 18 F-FDG-PET could provide an early imaging biomarker for acute respiratory distress syndrome (ARDS) before this condition is clinically established, as well as guide tissue sampling for gene expression analysis ( ). Of note, 18 F-FDG-PET kinetics allows for estimation of parameters characterizing tissue phosphorylation rate, associated with tumor aggressiveness and response to therapy in oncological studies ( ) and with cytokine gene expression in experimental acute lung injury (ALI) ( ). Accordingly, 18 F-FDG-PET kinetics parameters could be a promising tool to guide the analysis of gene expression datasets and identify pathways relevant to the mechanism and treatment of ALI.
Get Radiology Tree app to read full this article<
Materials and Methods
Get Radiology Tree app to read full this article<
Experimental Protocol
Get Radiology Tree app to read full this article<
Moderate Endotoxemia
Get Radiology Tree app to read full this article<
Get Radiology Tree app to read full this article<
Get Radiology Tree app to read full this article<
Transcriptome-wide gene expression analysis
Get Radiology Tree app to read full this article<
Mild Endotoxemia
Get Radiology Tree app to read full this article<
Imaging protocol
Get Radiology Tree app to read full this article<
Strain estimation
Get Radiology Tree app to read full this article<
Get Radiology Tree app to read full this article<
Image noise estimation
Get Radiology Tree app to read full this article<
Selection of Voxels for Analysis
Get Radiology Tree app to read full this article<
Aeration Levels
Get Radiology Tree app to read full this article<
Length-scale Analysis
Get Radiology Tree app to read full this article<
Statistical Analysis
Get Radiology Tree app to read full this article<
Get Radiology Tree app to read full this article<
Get Radiology Tree app to read full this article<
Results
Get Radiology Tree app to read full this article<
Get Radiology Tree app to read full this article<
Length-scales of Aeration Heterogeneity
Get Radiology Tree app to read full this article<
Get Radiology Tree app to read full this article<
Get Radiology Tree app to read full this article<
Table 1
Noise level estimate in the full resolution mean lung volume CT converted to F GAS and the SD of voxels inside the lung mask after removing the gravitational gradient and filtering with 5 mm kernel
0 hour 6 hours 24 hours_p_ valuesIkeda et al. ( ) 0.021 ± 0.002 0.021 ± 0.002 0.021 ± 0.003 Time = 0.376Christianson et al. ( ) 0.027 ± 0.003 0.026 ± 0.003 0.025 ± 0.003 Method <0.001SD within lungsupine 0.094 ± 0.016 0.095 ± 0.013 0.127 ± 0.019 –prone 0.069 ± 0.001 0.066 ± 0.005 0.078 ± 0.009
CT, computed tomography; Fgas, gas fraction; SD, standard deviation.
Get Radiology Tree app to read full this article<
Length-scales of Tidal Strain Heterogeneity
Get Radiology Tree app to read full this article<
Get Radiology Tree app to read full this article<
Get Radiology Tree app to read full this article<
Get Radiology Tree app to read full this article<
Get Radiology Tree app to read full this article<
Get Radiology Tree app to read full this article<
Regional Phosphorylation Rates and Gene-expression
Get Radiology Tree app to read full this article<
Get Radiology Tree app to read full this article<
Get Radiology Tree app to read full this article<
Table 2
Significant pathways amongst the genes that were correlated to 18 F-FDG kinetics parameters and tissue fraction. A pathway was considered significant if at least two of its’ genes were on the analyzed list and had EASE<0.1
Parameter Group Specific pathwaysTissue-specific uptake rate (Kis)Metabolism Fructose and mannose metabolism, Biosynthesis of antibioticsTissue specific volume of distribution (Fes)Environmental information processing PI3K-Akt signaling, Calcium signaling, NF-kappa B signaling, Jak-STAT signaling, TNF signaling, Cytokine-cytokine receptor interactionImmune system Toll-like receptor signaling, T cell receptor signaling, Natural killer cell mediated cytotoxicity, Antigen processing and presentationPhosphorylation rate (k 3 )Excretory system Aldosterone-regulated sodium reabsorptionTissue fraction (F TIS )Environmental information processing Jak-STAT signaling, Neuroactive ligand-receptor interactionImmune system Toll-like receptor signaling, T cell receptor signaling, RIG-I-like receptor signaling, Hematopoietic cell lineage
FDG, fluoro-d-glucose.
Table A.1
Complementary significant pathways amongst the genes that were correlated to the tissue-specific 18F-FDG volume of distribution and the tissue fraction. A pathway was considered significant if at least two of its’ genes were on the analyzed list and had an EASE <0.1.
Parameter Group PathwaysTissue specific volume of distribution (Fes)Diseases Alzheimer’s disease, Huntington’s disease, Salmonella infection, Pertussis, Legionellosis, Leishmaniasis, Chagas’ disease, African trypanosomiasis, Malaria, Toxoplasmosis, Amoebiasis, Tuberculosis, Hepatitis B, Measles, Influenza A, HTLV-1 infection, Herpes simplex infection, Proteoglycans cancer, Asthma, Inflammatory bowel disease, Rheumatoid arthritis, Allograft rejection, Graft-versus-host disease, Type I diabetes mellitus, Nonalcoholic fatty liver diseaseOther systems Prolactin signaling, Osteoclast differentiationTissue fraction (Ftiss)Diseases Salmonella infection, Pertussis, Leishmaniasis, Chagas’ disease, Influenza A, Pathways in cancerNervous system Long-term depression
FDG, fluoro-d-glucose.
Get Radiology Tree app to read full this article<
Discussion
Get Radiology Tree app to read full this article<
Methodological Considerations
Get Radiology Tree app to read full this article<
Get Radiology Tree app to read full this article<
Get Radiology Tree app to read full this article<
Get Radiology Tree app to read full this article<
Length-scale Analysis of Aeration and Tidal Strain Heterogeneity
Get Radiology Tree app to read full this article<
Get Radiology Tree app to read full this article<
Get Radiology Tree app to read full this article<
Get Radiology Tree app to read full this article<
Get Radiology Tree app to read full this article<
Gene Expression Analysis
Get Radiology Tree app to read full this article<
Get Radiology Tree app to read full this article<
Get Radiology Tree app to read full this article<
Limitations
Get Radiology Tree app to read full this article<
Conclusion
Get Radiology Tree app to read full this article<
Acknowledgments
Get Radiology Tree app to read full this article<
Appendix
Simulated Example of Length-Scales
Get Radiology Tree app to read full this article<
Get Radiology Tree app to read full this article<
References
1. Wellman TJ, Winkler T, Costa EL, et. al.: Effect of local tidal lung strain on inflammation in normal and lipopolysaccharide-exposed sheep*. Crit Care Med 2014; 42: pp. e491-e500.
2. Grasso S, Terragni P, Mascia L, et. al.: Airway pressure-time curve profile (stress index) detects tidal recruitment/hyperinflation in experimental acute lung injury. Crit Care Med 2004; 32: pp. 1018-1027.
3. Rodarte JR, Chaniotakis M, Wilson TA: Variability of parenchymal expansion measured by computed tomography. J Appl Physiol 1985; 67: pp. 226-231. 1989
4. Suki B, Stamenović D, Hubmayr R: Lung parenchymal mechanics.2011.John Wiley & Sons, Inc.
5. Mead J, Takishima T, Leith D: Stress distribution in lungs: a model of pulmonary elasticity. J Appl Physiol 1970; 28: pp. 596-608.
6. Protti A, Cressoni M, Santini A, et. al.: Lung stress and strain during mechanical ventilation: any safe threshold?. Am J Respir Crit Care Med 2011; 183: pp. 1354-1362.
7. Gonzalez-Lopez A, Garcia-Prieto E, Batalla-Solis E, et. al.: Lung strain and biological response in mechanically ventilated patients. Intensive Care Med 2012; 38: pp. 240-247.
8. Paula LF, Wellman TJ, Winkler T, et. al.: Regional tidal lung strain in mechanically ventilated normal lungs. J Appl Physiol 2016; 121: pp. 1335-1347.
9. Gattinoni L, Carlesso E, Cadringher P, et. al.: Physical and biological triggers of ventilator-induced lung injury and its prevention. Eur Respir J Suppl 2003; 47: pp. 15s-25s.
10. Wellman TJ, de Prost N, Tucci M, et. al.: Lung metabolic activation as an early biomarker of acute respiratory distress syndrome and local gene expression heterogeneity. Anesthesiology 2016; 125: pp. 992-1004.
11. Schroeder T, Vidal Melo MF, Musch G, Harris RS, Venegas JG, Winkler T: Image-derived input function for assessment of 18F-FDG uptake by the inflamed lung. J Nucl Med 2007; 48: pp. 1889-1896.
12. de Prost N, Feng Y, Wellman T, et. al.: 18F-FDG kinetics parameters depend on the mechanism of injury in early experimental acute respiratory distress syndrome. J Nucl Med 2014; 55: pp. 1871-1877.
13. Okazumi S, Isono K, Enomoto K, et. al.: Evaluation of liver tumors using fluorine-18-fluorodeoxyglucose PET: characterization of tumor and assessment of effect of treatment. J Nucl Med 1992; 33: pp. 333-339.
14. Dimitrakopoulou-Strauss A, Strauss LG, Burger C, et. al.: Prognostic aspects of 18F-FDG PET kinetics in patients with metastatic colorectal carcinoma receiving FOLFOX chemotherapy. J Nucl Med 2004; 45: pp. 1480-1487.
15. Schroeder T, Vidal Melo MF, Musch G, et. al.: Modeling pulmonary kinetics of 2-deoxy-2-[(18)F]fluoro-d-glucose during acute lung injury. Acad Radiol 2008; 15: pp. 763-775.
16. Acute Respiratory Distress Syndrome Network: Ventilation with lower tidal volumes as compared with traditional tidal volumes for acute lung injury and the acute respiratory distress syndrome. The acute respiratory distress syndrome network. N Engl J Med 2000; 342: pp. 1301-1308.
17. Vidal Melo MF, Layfield D, Harris RS, et. al.: Quantification of regional ventilation-perfusion ratios with PET. J Nucl Med 2003; 44: pp. 1982-1991.
18. Harris RS, Willey-Courand DB, Head CA, et. al.: Regional VA, Q, and VA/Q during PLV: effects of nitroprusside and inhaled nitric oxide. J Appl Physiol 2002; 92: pp. 297-312.
19. Rota Kops E, Herzog H, Schmid A, et. al.: Performance characteristics of an eight-ring whole body PET scanner. J Comput Assist Tomogr 1990; 14: pp. 437-445.
20. Wellman TJ, Winkler T, Vidal Melo MF: Modeling of tracer transport delays for improved quantification of regional pulmonary F-FDG Kinetics, vascular transit times, and perfusion. Ann Biomed Eng 2015; 43: pp. 2722-2734.
21. Grogg KS, Toole T, Ouyang J, et. al.: National electrical manufacturers association and clinical evaluation of a novel brain PET/CT scanner. J Nucl Med 2016; 57: pp. 646-652.
22. Tustison NJ, Avants BB: Explicit B-spline regularization in diffeomorphic image registration. Front Neuroinform 2013; 7: pp. 39.
23. Reinhardt JM, Ding K, Cao K, et. al.: Registration-based estimates of local lung tissue expansion compared to xenon CT measures of specific ventilation. Med Image Anal 2008; 12: pp. 752-763.
24. Kaczka DW, Cao K, Christensen GE, Bates JHT, Simon BA: Analysis of regional mechanics in canine lung injury using forced oscillations and 3D image registration. Ann Biomed Eng 2011; 39: pp. 1112-1124.
25. Choi S, Hoffman EA, Wenzel SE, et. al.: Registration-based assessment of regional lung function via volumetric CT images of normal subjects vs. severe asthmatics. J Appl Physiol 1985; 115: pp. 730-742. 2013
26. Du K, Bayouth JE, Cao K, et. al.: Reproducibility of registration-based measures of lung tissue expansion. Med Phys 2012; 39: pp. 1595-1608.
27. Murphy K, van Ginneken B, Pluim JP, et. al.: Semi-automatic reference standard construction for quantitative evaluation of lung CT registration. Med Image Comput Comput Assist Interv 2008; 11: pp. 1006-1013.
28. Ikeda M, Makino R, Imai K, et. al.: A method for estimating noise variance of CT image. Comput Med Imaging Graph 2010; 34: pp. 642-650.
29. Christianson O, Winslow J, Frush DP, et. al.: Automated technique to measure noise in clinical CT examinations. Am J Roentgenol 2015; 205: pp. W93-W99.
30. Vidal Melo MF, Winkler T, Harris RS, et. al.: Spatial heterogeneity of lung perfusion assessed with (13)N PET as a vascular biomarker in chronic obstructive pulmonary disease. J Nucl Med 2010; 51: pp. 57-65.
31. Borges JB, Okamoto VN, Matos GF, et. al.: Reversibility of lung collapse and hypoxemia in early acute respiratory distress syndrome. Am J Respir Crit Care Med 2006; 174: pp. 268-278.
32. Wellman TJ, Winkler T, Costa EL, et. al.: Effect of regional lung inflation on ventilation heterogeneity at different length scales during mechanical ventilation of normal sheep lungs. J Appl Physiol 2012; 113: pp. 947-957.
33. Venegas JG, Galletti GG: Low-pass filtering, a new method of fractal analysis: application to PET images of pulmonary blood flow. J Appl Physiol 2000; 88: pp. 1365-1373.
34. Huang da W, Sherman BT, Lempicki RA: Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources. Nat Protoc 2009; 4: pp. 44-57.
35. Sapoval B, Filoche M, Weibel ER: Smaller is better—but not too small: a physical scale for the design of the mammalian pulmonary acinus. Proc Nat Acad Sci 2002; 99: pp. 10411-10416.
36. Webb WR: Thin-section CT of the secondary pulmonary lobule: anatomy and the image—the 2004 Fleischner lecture. Radiology 2006; 239: pp. 322-338.
37. Mertens M, Tabuchi A, Meissner S, et. al.: Alveolar dynamics in acute lung injury: heterogeneous distension rather than cyclic opening and collapse. Crit Care Med 2009; 37: pp. 2604-2611.
38. Perlman CE, Bhattacharya J: Alveolar expansion imaged by optical sectioning microscopy. J Appl Physiol 2007; 103: pp. 1037-1044.
39. Bayat S, Porra L, Albu G, et. al.: Effect of positive end-expiratory pressure on regional ventilation distribution during mechanical ventilation after surfactant depletion. Anesthesiology 2013; 119: pp. 89-100.
40. Cereda M, Emami K, Xin Y, et. al.: Imaging the interaction of atelectasis and overdistension in surfactant-depleted lungs. Crit Care Med 2013; 41: pp. 527-535.
41. Olson LE, Rodarte JR: Regional differences in expansion in excised dog lung lobes. J Appl Physiol 1984; 57: pp. 1710-1714.
42. Glenny RW: Emergence of matched airway and vascular trees from fractal rules. J Appl Physiol 2011; 110: pp. 1119.
43. Dolinay T, Kaminski N, Felgendreher M, et. al.: Gene expression profiling of target genes in ventilator-induced lung injury. Physiol Genomics 2006; 26: pp. 68-75.
44. Copland IB, Kavanagh BP, Engelberts D, et. al.: Early changes in lung gene expression due to high tidal volume. Am J Respir Crit Care Med 2003; 168: pp. 1051-1059.
45. Spooner CE, Markowitz NP, Saravolatz LD: The role of tumor necrosis factor in sepsis. Clin Immunol Immunopathol 1992; 62: pp. S11-S17.
46. Liu SF, Malik AB: NF-kappaB activation as a pathological mechanism of septic shock and inflammation. Am J Physiol Lung Cell Mol Physiol 2006; 290: pp. L622.
47. Brubaker SW, Bonham KS, Zanoni I, Kagan JC: Innate Immune Pattern Recognition: A Cell Biological Perspective. Annu Rev Immunol 2015; 33: pp. 257-290.
48. Cereda M, Xin Y, Hamedani H, et. al.: Tidal changes on CT and progression of ARDS. Thorax 2017; 72: pp. 981-989.
49. Olivera W, Ciccolella D, Barquin N, et. al.: Aldosterone regulates Na,K-ATPase and increases lung edema clearance in rats. Am J Respir Crit Care Med 2000; 161: pp. 567-573.